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PDBsum entry 2ql2
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Pore analysis for: 2ql2 calculated with MOLE 2.0
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PDB id
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2ql2
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.24 |
1.52 |
62.7 |
-1.50 |
-0.23 |
25.1 |
82 |
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6 |
2 |
2 |
5 |
0 |
0 |
0 |
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DA 2 G DG 3 G DG 4 G DC 5 G DC 6 G DA 7 G DT 8 G DG 11 G DT 13 G DG 21 H DG 22 H DA 23 H DC 24 H DC 25 H DA 26 H DT 29 H DG 31 H DC 32 H
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2 |
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1.38 |
1.36 |
93.4 |
-1.23 |
-0.50 |
18.0 |
79 |
7 |
3 |
2 |
4 |
0 |
0 |
0 |
DG 4 E DC 5 E DC 6 E DA 7 E DT 8 E DT 13 E DA 20 F DG 21 F DG 22 F DA 23 F DC 24 F DC 25 F DA 26 F DC 33 F DT 34 F DA 35 F
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3 |
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1.63 |
1.61 |
160.6 |
-0.92 |
-0.27 |
11.4 |
84 |
7 |
2 |
8 |
14 |
2 |
0 |
0 |
DT 13 E DA 20 F DG 21 F DG 22 F DA 23 F DC 24 F DG 11 G DT 13 G DG 21 H DG 22 H DA 23 H DC 24 H
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4 |
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1.60 |
1.73 |
180.6 |
-1.05 |
-0.47 |
12.7 |
87 |
7 |
4 |
7 |
9 |
0 |
0 |
0 |
DT 13 E DA 20 F DG 21 F DG 22 F DA 23 F DC 24 F D A 2 G DG 3 G DG 4 G DC 5 G DG 31 H DC 32 H DT 34 H DA 35 H
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5 |
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1.00 |
1.02 |
218.2 |
-1.05 |
-0.33 |
13.8 |
82 |
11 |
3 |
10 |
15 |
2 |
0 |
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DG 4 E DC 5 E DC 6 E DA 7 E DT 8 E DA 23 F DC 24 F DC 25 F DA 26 F DC 33 F DT 34 F DA 35 F DG 11 G DT 13 G DG 21 H DG 22 H DA 23 H DC 24 H
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6 |
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1.21 |
1.37 |
226.9 |
-1.02 |
-0.40 |
14.4 |
85 |
11 |
4 |
9 |
10 |
0 |
0 |
0 |
DG 4 E DC 5 E DC 6 E DA 7 E DT 8 E DA 23 F DC 24 F DC 25 F DA 26 F DC 33 F DT 34 F DA 35 F DA 2 G DG 3 G DG 4 G DC 5 G DG 31 H DC 32 H DT 34 H DA 35 H
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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