PDBsum entry 2qej Go to PDB code:  Tunnel analysis for: 2qej calculated with MOLE 2.0 PDB id 2qej Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.41 2.61 16.3 -1.46 -0.28 19.6 76 3 1 1 2 0 1 0   2 1.30 2.46 17.1 -1.43 -0.71 16.0 91 2 1 2 1 0 1 0   3 1.28 2.12 15.1 0.53 0.06 15.3 75 0 2 0 4 0 1 0   4 1.27 2.08 15.7 0.75 0.12 14.5 75 0 2 0 4 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.