PDBsum entry 2qad Go to PDB code:  Pore analysis for: 2qad calculated with MOLE 2.0 PDB id 2qad Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.32 2.42 38.9 -1.41 -0.76 12.5 90 1 4 7 1 0 1 1  NAG 762 A 2 2.55 2.55 43.3 -2.06 -0.74 11.2 95 3 1 13 1 0 1 1  NAG 795 A NAG 801 A NAG 832 A NAG 913 A NAG 762 E NAG 795 E NAG 913 E 3 1.32 2.53 43.4 -1.19 -0.04 10.5 79 2 3 7 4 4 2 1  NAG 762 A NAG 948 A 4 1.51 1.66 49.5 -2.20 -0.44 21.4 79 4 3 3 3 1 3 0  TYS 100 H i:C TYS 100 H 5 1.14 2.43 61.8 -0.03 -0.14 6.4 88 2 2 4 8 2 1 0   6 1.69 2.24 64.9 -1.51 -0.59 13.5 88 2 4 9 5 1 3 1  NAG 762 A TYS 100 H TYS 100 H i:C 7 1.51 2.36 70.3 -1.46 -0.56 17.1 87 4 4 9 4 1 0 1  NAG 762 E NAG 948 E 8 1.50 2.32 74.7 -1.79 -0.39 17.2 91 6 4 12 4 1 0 0  NAG 795 A NAG 801 A NAG 832 A NAG 900 A NAG 913 A NAG 762 E NAG 795 E NAG 913 E NAG 948 E 9 2.69 2.82 161.0 -1.34 -0.49 15.5 85 10 7 13 7 3 5 0   10 1.26 2.53 217.3 -1.70 -0.63 16.2 90 7 8 22 3 1 4 0   11 0.73 0.73 250.8 -0.80 -0.31 9.8 87 7 5 15 14 5 7 0   12 0.97 1.90 281.5 -1.79 -0.48 19.0 84 11 13 19 7 3 7 0  MLA 215 H 13 1.30 2.47 307.6 -1.69 -0.52 17.6 87 11 10 22 6 3 6 0  MLA 215 H Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.