PDBsum entry 2q9i Go to PDB code:  Pore analysis for: 2q9i calculated with MOLE 2.0 PDB id 2q9i Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.15 2.19 31.8 -0.58 -0.20 14.7 75 2 1 2 2 0 1 2   2 1.61 3.11 26.4 -0.63 -0.16 12.6 85 3 2 3 3 2 0 0   3 1.64 3.05 31.4 -0.82 -0.13 15.5 77 5 2 2 1 2 0 0  CA 1 F 4 1.59 1.67 33.5 -1.27 -0.38 13.6 80 3 3 2 3 3 2 0   5 1.83 1.98 35.3 -0.88 -0.25 14.5 81 5 2 2 4 2 2 0   6 1.58 1.66 53.3 -0.47 -0.18 6.7 80 2 3 3 7 6 1 0   7 1.36 1.59 25.6 0.14 0.05 13.1 85 3 1 2 5 1 1 0   8 1.35 1.59 32.5 -0.53 0.04 14.8 86 4 2 3 4 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.