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PDBsum entry 2q6t

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Pore analysis for: 2q6t calculated with MOLE 2.0 PDB id
2q6t
Pores calculated on whole structure Pores calculated excluding ligands

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18 pores, coloured by radius 18 pores, coloured by radius 18 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.77 2.00 46.4 -2.07 -0.52 28.5 81 6 5 2 3 0 1 0  
2 1.60 1.85 51.2 -0.47 -0.05 14.5 84 4 1 3 7 0 3 1  SO4 445 B
3 1.60 1.86 59.9 -0.47 -0.05 12.3 83 4 1 3 6 1 3 1  SO4 445 B
4 1.44 3.13 74.2 -2.13 -0.49 24.8 81 7 5 7 6 0 1 0  
5 1.51 2.24 77.9 -1.56 -0.53 24.6 85 7 10 5 6 0 1 0  
6 1.49 2.15 80.8 -1.58 -0.46 26.5 84 8 11 3 7 0 1 0  
7 2.64 2.90 83.2 -1.97 -0.58 27.6 82 9 11 4 5 0 4 0  
8 1.46 2.58 85.4 -1.64 -0.47 26.4 85 10 12 6 9 0 3 0  
9 1.88 2.10 86.1 -2.04 -0.55 29.1 82 10 12 2 6 0 4 0  
10 1.59 3.79 96.1 -2.22 -0.53 26.1 80 11 8 6 6 0 2 0  
11 1.42 3.55 106.0 -3.11 -0.64 30.2 83 10 6 10 3 1 3 0  
12 2.39 3.65 112.5 -2.54 -0.43 28.0 82 11 9 8 7 1 3 0  
13 1.30 3.68 123.1 -2.22 -0.63 24.9 85 9 12 13 5 1 1 0  
14 1.78 2.00 136.1 -2.38 -0.45 27.2 82 14 10 9 7 1 3 0  
15 2.74 4.89 152.3 -2.80 -0.70 29.2 85 14 13 11 3 1 5 0  
16 1.68 1.70 160.4 -2.51 -0.66 26.3 86 12 14 16 5 2 2 0  
17 1.79 1.80 25.9 -1.21 -0.37 16.5 92 3 1 5 5 0 0 0  SO4 445 A
18 1.55 1.71 28.6 -1.46 -0.63 15.3 91 3 2 4 4 0 0 0  SO4 445 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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