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PDBsum entry 2q14

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Pore analysis for: 2q14 calculated with MOLE 2.0 PDB id
2q14
Pores calculated on whole structure Pores calculated excluding ligands

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15 pores, coloured by radius 26 pores, coloured by radius 26 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.30 3.46 33.0 -1.98 -0.52 24.3 74 6 6 1 0 3 1 0  ADP 501 F
2 3.89 4.03 38.9 -1.99 -0.72 22.5 77 6 8 1 0 1 1 0  
3 2.73 2.79 44.9 -1.61 -0.60 17.6 78 2 9 4 1 2 1 0  
4 2.73 2.79 47.8 -2.14 -0.69 26.0 82 7 7 4 0 1 1 0  ADP 501 F
5 1.84 2.08 52.2 -1.17 0.02 16.4 77 7 4 3 2 4 0 0  MSE 387 E MSE 361 H GOL 502 H
6 1.17 3.43 64.3 -0.59 0.13 16.9 74 7 4 1 9 4 0 0  MSE 361 B MSE 387 B MSE 361 C MSE 387 C
7 3.41 4.29 66.0 -2.25 -0.54 25.4 82 8 7 6 3 2 0 0  ADP 501 H
8 2.78 2.77 71.8 -1.33 -0.39 19.0 76 9 5 2 4 6 1 0  ADP 501 H
9 1.42 1.44 82.1 -1.49 -0.15 20.6 77 15 6 4 5 9 1 0  ADP 501 C EDO 502 C
10 1.44 1.66 81.9 -1.65 -0.22 25.7 79 9 7 4 9 2 0 0  MSE 124 G MSE 127 G MSE 131 G ADP 501 H
11 1.54 2.13 90.2 -1.79 -0.20 22.5 78 12 7 3 2 6 0 0  MSE 361 F ADP 501 F MSE 387 G
12 1.44 1.45 95.8 -1.58 -0.36 20.8 78 14 10 4 5 8 2 0  ADP 501 C EDO 502 C
13 1.38 1.62 94.9 -0.59 -0.21 15.7 77 5 8 5 12 5 2 0  MSE 124 G MSE 127 G MSE 131 G
14 2.65 2.90 95.6 -1.68 -0.45 23.9 80 12 7 3 0 5 4 0  MSE 1 D ADP 501 F
15 2.18 4.53 98.5 -1.41 -0.35 15.2 79 9 8 9 2 11 3 0  
16 1.47 1.66 105.6 -1.01 -0.42 17.7 82 6 12 6 8 2 3 0  MSE 1 D MSE 124 G MSE 127 G MSE 131 G
17 2.81 2.96 109.1 -1.76 -0.51 21.4 82 11 14 5 3 4 3 0  MSE 1 D ADP 501 H
18 2.10 4.50 108.7 -1.38 -0.38 16.2 81 7 8 11 2 12 4 0  MSE 1 D
19 1.39 1.64 117.5 -1.44 -0.45 21.1 80 9 8 10 9 2 1 0  ADP 501 C MSE 124 G MSE 127 G MSE 131 G
20 1.25 1.41 121.9 -0.90 -0.09 13.5 78 14 2 10 12 10 1 0  MSE 233 A MSE 310 A EDO 503 A MSE 361 B ADP 501 B
MSE 387 C
21 1.20 1.38 133.2 -1.45 -0.15 16.6 78 13 5 12 11 8 2 0  MSE 233 E MSE 310 E ADP 501 F
22 1.46 1.67 136.9 -1.26 -0.34 16.5 81 9 12 14 10 9 2 0  MSE 124 G MSE 127 G MSE 131 G
23 1.49 1.50 156.1 -1.47 -0.33 21.1 79 13 10 9 6 11 5 0  ADP 501 C EDO 502 C MSE 1 D
24 1.40 1.65 161.4 -1.23 -0.24 19.3 79 15 10 12 14 8 2 0  ADP 501 C EDO 502 C MSE 124 G MSE 127 G MSE 131 G
25 1.98 2.39 201.7 -1.53 -0.39 19.2 81 22 17 13 7 13 4 0  MSE 361 B ADP 501 B MSE 387 C MSE 1 D ADP 501 F
26 1.48 1.67 230.3 -1.34 -0.36 18.7 81 18 18 16 15 11 4 0  MSE 361 B ADP 501 B MSE 387 C MSE 1 D MSE 124 G
MSE 127 G MSE 131 G

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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