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PDBsum entry 2pzs
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Pore analysis for: 2pzs calculated with  MOLE 2.0
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PDB id
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2pzs
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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19 pores,
coloured by radius |
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19 pores,
coloured by radius
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19 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.02 |
2.02 |
36.2 |
-0.85 |
-0.50 |
12.4 |
95 |
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2 |
2 |
3 |
4 |
0 |
0 |
0 |
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DG 1 X DA 2 X DC 3 X DT 4 X DA 4 Y DA 6 Y DG 8 Y
DT 9 Y DC 17 Y
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2 |
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1.53 |
1.53 |
43.5 |
-0.88 |
-0.38 |
11.4 |
91 |
3 |
1 |
3 |
4 |
1 |
0 |
0 |
DG 1 X DA 2 X DC 3 X DT 4 X DA 4 Y DC 5 Y DA 6 Y
DG 8 Y DT 9 Y DC 17 Y
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3 |
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1.46 |
1.82 |
54.9 |
-2.86 |
-0.58 |
39.5 |
77 |
10 |
10 |
1 |
1 |
1 |
0 |
0 |
DC 4 T
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4 |
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1.94 |
2.13 |
56.3 |
-0.46 |
-0.37 |
13.1 |
86 |
6 |
2 |
1 |
4 |
1 |
0 |
0 |
DT 4 X DG 5 X DT 16 Y DC 17 Y
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5 |
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2.18 |
2.18 |
62.6 |
-2.37 |
-0.61 |
32.1 |
74 |
7 |
9 |
0 |
1 |
2 |
0 |
0 |
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6 |
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2.01 |
2.04 |
72.7 |
-1.05 |
-0.40 |
14.6 |
83 |
6 |
5 |
5 |
6 |
1 |
2 |
0 |
DT 7 X DT 8 X DA 4 Y DA 6 Y DG 8 Y DT 9 Y
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7 |
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1.47 |
1.82 |
72.1 |
-2.36 |
-0.49 |
34.7 |
76 |
13 |
13 |
0 |
2 |
2 |
1 |
0 |
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8 |
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1.62 |
1.69 |
72.6 |
-2.36 |
-0.47 |
31.9 |
78 |
9 |
9 |
0 |
1 |
2 |
2 |
0 |
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9 |
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4.47 |
8.23 |
73.9 |
-2.67 |
-0.47 |
38.4 |
76 |
15 |
11 |
0 |
2 |
2 |
1 |
0 |
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10 |
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2.03 |
2.10 |
74.6 |
-1.65 |
-0.38 |
24.2 |
77 |
7 |
5 |
2 |
3 |
1 |
1 |
0 |
DG 1 R DA 2 R DC 3 R DC 6 R DT 7 R DT 8 R DA 9 R
DC 10 R DG 8 S DT 9 S DA 10 S DA 11 S DG 12 S DC
13 S DA 14 S
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11 |
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4.12 |
7.49 |
80.5 |
-2.50 |
-0.43 |
38.3 |
75 |
18 |
15 |
1 |
3 |
2 |
1 |
0 |
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12 |
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1.20 |
1.20 |
97.4 |
-0.62 |
0.03 |
19.3 |
80 |
9 |
8 |
4 |
10 |
3 |
1 |
0 |
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13 |
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1.48 |
1.85 |
100.6 |
-2.19 |
-0.48 |
31.9 |
76 |
14 |
14 |
0 |
2 |
4 |
0 |
0 |
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14 |
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1.62 |
1.68 |
106.0 |
-0.90 |
-0.31 |
16.5 |
82 |
8 |
4 |
2 |
5 |
1 |
1 |
0 |
DG 1 R DA 2 R DC 3 R DT 4 R DG 5 R DA 11 S DG 12
S DC 13 S DA 14 S DT 16 S DC 17 S
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15 |
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1.67 |
1.73 |
114.6 |
-2.83 |
-0.49 |
37.1 |
75 |
19 |
11 |
0 |
1 |
3 |
3 |
0 |
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16 |
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2.01 |
2.00 |
122.7 |
-1.56 |
-0.50 |
22.4 |
79 |
13 |
10 |
4 |
7 |
1 |
1 |
0 |
DT 8 X DA 9 X DC 10 X DA 4 Y DA 6 Y DG 8 Y DT 9 Y
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17 |
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1.49 |
1.84 |
131.7 |
-2.41 |
-0.49 |
31.9 |
75 |
16 |
12 |
0 |
1 |
5 |
1 |
0 |
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18 |
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1.18 |
1.18 |
162.2 |
-1.58 |
-0.22 |
27.7 |
76 |
18 |
14 |
2 |
8 |
4 |
1 |
0 |
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19 |
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1.21 |
1.21 |
169.4 |
-1.00 |
-0.27 |
19.9 |
82 |
12 |
10 |
4 |
10 |
4 |
0 |
0 |
DA 1 T DA 4 Y DC 5 Y DA 6 Y DC 7 Y DG 8 Y
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program