PDBsum entry 2py5 Go to PDB code:  Pore analysis for: 2py5 calculated with MOLE 2.0 PDB id 2py5 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.78 1.96 29.2 -0.78 -0.30 17.9 87 4 2 2 4 0 0 0  DG 1 E DG 2 E DA 3 E DC 4 E DT 5 E DT 6 E 2 4.59 5.95 37.6 -2.61 -0.48 36.0 77 8 4 1 1 1 1 0  EDO 9003 B DC 4 E DT 5 E DT 6 E 3 1.93 2.91 45.2 -0.84 -0.38 16.7 85 5 2 3 4 1 0 0  EDO 8011 A DA 3 D DC 4 D DT 5 D DT 6 D DC 4 Y DT 5 Y 4 2.16 2.16 48.9 -1.38 -0.63 16.0 80 3 3 1 2 2 0 0  EDO 9010 A DT 6 D DG 2 J DA 3 J DC 4 J DT 5 J DC 4 Y DT 5 Y 5 1.89 1.92 49.1 -0.81 -0.28 17.4 84 4 4 2 5 1 0 0  DG 1 E DG 2 E DA 3 E DC 4 E DT 5 E DC 4 Y DT 5 Y 6 2.17 2.17 50.2 -1.57 -0.52 17.8 79 4 4 2 3 2 0 0  EDO 9010 A DT 6 D DT 6 E DG 2 J DA 3 J DC 4 J DT 5 J 7 3.41 3.47 56.8 -2.75 -0.55 38.0 74 12 4 0 1 0 1 0  EDO 9012 A EDO 9014 A 8 2.18 2.18 69.0 -2.14 -0.59 28.3 78 11 7 1 3 2 0 0  EDO 9010 A EDO 9014 A DT 6 D DG 2 J DA 3 J DC 4 J DC 4 Y DT 5 Y 9 2.18 2.18 87.2 -2.05 -0.52 26.5 77 13 8 2 4 2 1 0  EDO 9010 A EDO 9012 A EDO 9014 A DT 6 D DT 6 E DG 2 J DA 3 J DC 4 J 10 1.89 1.91 90.8 -1.08 -0.50 18.1 85 6 7 4 6 2 0 0  EDO 9010 A DT 6 D DG 1 E DG 2 E DA 3 E DC 4 E DT 5 E DG 2 J DA 3 J DC 4 J DT 5 J 11 1.88 1.89 127.8 -1.48 -0.50 23.5 81 14 11 4 7 2 1 0  EDO 9010 A EDO 9012 A EDO 9014 A DT 6 D DG 1 E DG 2 E DA 3 E DC 4 E DT 5 E DG 2 J DA 3 J DC 4 J Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.