 |
PDBsum entry 2prh
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 2prh calculated with  MOLE 2.0
|
PDB id
|
|
|
|
2prh
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
1 tunnel,
coloured by tunnel radius |
|
8 tunnels,
coloured by
tunnel radius
|
8 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.65 |
1.77 |
25.1 |
0.78 |
0.26 |
5.2 |
75 |
|
1 |
0 |
1 |
8 |
2 |
2 |
0 |
|
238 400 A DDQ 630 A
|
 |
|
2 |
 |
1.52 |
2.48 |
25.6 |
1.33 |
0.42 |
2.2 |
75 |
1 |
0 |
0 |
9 |
3 |
2 |
0 |
238 400 A DDQ 630 A
|
|
3 |
 |
1.49 |
1.48 |
26.7 |
0.46 |
0.23 |
5.1 |
77 |
1 |
0 |
1 |
7 |
2 |
2 |
0 |
238 400 A DDQ 630 A
|
|
4 |
 |
1.51 |
2.46 |
27.2 |
0.91 |
0.38 |
2.7 |
77 |
1 |
0 |
0 |
8 |
3 |
2 |
0 |
238 400 A DDQ 630 A
|
|
5 |
 |
1.49 |
2.36 |
30.6 |
-0.98 |
-0.24 |
6.5 |
79 |
2 |
0 |
4 |
2 |
3 |
2 |
0 |
FMN 398 A ORO 399 A 238 400 A
|
|
6 |
 |
1.45 |
1.46 |
34.1 |
-1.14 |
-0.24 |
7.7 |
82 |
4 |
0 |
4 |
2 |
3 |
2 |
0 |
FMN 398 A ORO 399 A 238 400 A
|
|
7 |
 |
1.41 |
1.91 |
35.6 |
-0.30 |
-0.08 |
8.2 |
91 |
3 |
1 |
4 |
4 |
2 |
1 |
0 |
FMN 398 A 238 400 A
|
 |
8 |
 |
1.41 |
1.86 |
39.2 |
-0.60 |
-0.14 |
9.4 |
91 |
4 |
1 |
4 |
4 |
2 |
1 |
0 |
FMN 398 A 238 400 A
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program