PDBsum entry 2pl2

Pore analysis for: 2pl2 calculated with

MOLE 2.0

PDB id

2pl2

Pores calculated on whole structure

Pores calculated excluding ligands

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12 pores, coloured by radius

12 pores, coloured by radius

12 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.52

1.57

25.5

-1.41

-0.31

11.0

78

2

1

3

3

1

1

0

2

2.86

4.81

27.0

-2.02

-0.39

32.5

79

3

5

2

2

1

0

0

3

1.64

2.40

31.0

-2.10

-0.25

30.8

70

3

4

1

3

3

1

0

4

1.64

2.43

36.1

-1.62

-0.21

28.2

75

4

4

2

4

2

1

0

5

2.87

4.78

40.3

-2.12

-0.27

27.4

76

3

6

1

3

2

0

0

6

2.55

5.04

44.2

-2.17

-0.28

28.5

74

3

6

1

3

3

0

0

7

2.95

5.88

45.1

-1.95

-0.21

22.4

68

1

8

0

1

6

1

0

8

1.56

1.82

49.4

-1.39

-0.35

16.9

78

5

3

5

7

2

1

0

9

2.92

4.20

50.8

-1.79

-0.10

26.9

70

4

6

1

5

7

1

0

10

2.54

5.12

53.3

-2.00

-0.28

29.2

74

6

4

2

6

3

0

0

11

1.67

2.55

64.5

-2.03

-0.08

26.1

68

5

9

1

5

8

2

0

12

1.44

3.08

64.9

-1.90

-0.11

26.7

69

7

5

2

8

6

1

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.