 |
PDBsum entry 2pcv
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 2pcv calculated with MOLE 2.0
|
PDB id
|
|
|
|
2pcv
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
6 tunnels,
coloured by tunnel radius |
 |
6 tunnels,
coloured by
tunnel radius
|
6 tunnels,
coloured as in list below
|
|
|
 |
 |
|
|
 |
|
|
|
 |
Length
|
 |
|
|
|
|
 |
Hydropathy
|
 |
|
|
|
|
 |
Hydrophobicity
|
 |
|
|
|
|
 |
Polarity
|
 |
|
|
|
|
 |
Mutability
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.58 |
4.6 |
-0.40 |
-0.80 |
3.4 |
0 |
 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
 |
6 C A,30 U A,31 G A,32 G A
|
 |
 |
2 |
 |
1.87 |
7.3 |
0.00 |
0.00 |
0.0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
29 G A,30 U A,31 G A,32 G A
|
 |
3 |
 |
2.73 |
12.5 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
5 C A,6 C A,27 C A,28 A A,30 U A,31 G A,32 G A
|
 |
4 |
 |
2.67 |
13.7 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
5 C A,6 C A,7 G A,28 A A,30 U A,31 G A,32 G A
|
 |
5 |
 |
2.14 |
3.9 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
16 G A,18 G A,19 A A
|
 |
6 |
 |
1.32 |
26.9 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
13 G A,14 C A,15 A A,16 G A,18 G A,19 A A,21 G A, 22 C A,23 A A
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |