 |
PDBsum entry 2pc6
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 2pc6 calculated with MOLE 2.0
|
PDB id
|
|
|
|
2pc6
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
6 pores,
coloured by radius |
 |
7 pores,
coloured by radius
|
7 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.24 |
1.31 |
31.7 |
0.04 |
-0.24 |
9.2 |
88 |
 |
1 |
2 |
4 |
7 |
0 |
1 |
0 |
 |
MSE 9 C MSE 46 C
|
 |
 |
2 |
 |
1.17 |
1.23 |
90.0 |
-0.67 |
-0.29 |
14.5 |
81 |
6 |
7 |
6 |
9 |
2 |
2 |
1 |
|
 |
3 |
 |
1.19 |
1.23 |
104.9 |
0.43 |
-0.09 |
6.7 |
84 |
3 |
5 |
8 |
19 |
3 |
2 |
0 |
MSE 9 D MSE 46 D
|
 |
4 |
 |
1.51 |
1.54 |
114.8 |
-1.10 |
-0.27 |
15.8 |
86 |
7 |
5 |
7 |
13 |
2 |
2 |
0 |
MSE 9 D MSE 46 D
|
 |
5 |
 |
1.99 |
1.98 |
139.8 |
-2.21 |
-0.61 |
20.9 |
88 |
10 |
7 |
9 |
2 |
1 |
1 |
1 |
|
 |
6 |
 |
1.13 |
1.24 |
161.1 |
-1.68 |
-0.44 |
17.1 |
86 |
10 |
9 |
8 |
7 |
3 |
2 |
0 |
|
 |
7 |
 |
1.34 |
2.16 |
169.0 |
-1.72 |
-0.59 |
19.8 |
88 |
7 |
9 |
12 |
4 |
1 |
2 |
1 |
MSE 1 B
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |