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PDBsum entry 2p9k

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Pore analysis for: 2p9k calculated with MOLE 2.0 PDB id
2p9k
Pores calculated on whole structure Pores calculated excluding ligands

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11 pores, coloured by radius 16 pores, coloured by radius 16 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.54 1.65 26.6 -0.98 -0.22 12.9 81 1 1 2 1 2 1 0  
2 1.39 1.45 33.9 -0.99 -0.33 9.2 78 2 1 4 4 2 3 1  CA 501 B ATP 602 B
3 1.46 1.66 36.0 -1.42 -0.45 17.2 75 3 4 3 2 3 2 0  CA 501 B ATP 602 B
4 1.54 1.64 39.7 0.43 0.15 10.7 74 3 3 1 9 5 1 0  
5 1.39 2.41 40.6 -1.46 -0.33 18.6 80 7 1 2 4 1 0 0  
6 1.39 1.45 42.6 -1.42 -0.44 19.3 77 5 4 2 2 3 3 1  CA 501 B ATP 602 B
7 1.23 2.78 49.1 -1.94 -0.63 20.6 83 5 6 8 2 1 2 2  
8 2.07 3.21 58.5 -2.76 -0.57 36.0 77 9 6 1 2 0 2 0  
9 2.50 2.57 59.9 -1.36 -0.13 18.9 79 4 6 4 6 3 0 0  ATP 602 B
10 1.45 1.66 62.6 -1.55 -0.40 19.4 81 6 6 5 4 2 1 0  CA 501 B ATP 602 B
11 2.50 2.57 63.6 -0.66 0.08 19.6 74 5 5 2 5 5 1 0  ATP 602 B
12 1.39 1.45 69.3 -1.56 -0.41 20.6 82 8 6 4 4 2 2 1  CA 501 B ATP 602 B
13 1.45 1.67 78.1 -0.66 -0.08 15.1 77 5 5 5 7 5 1 0  CA 501 B ATP 602 B
14 1.67 1.75 78.8 -2.67 -0.59 31.6 83 17 7 4 2 0 1 0  
15 1.40 1.46 84.4 -0.74 -0.13 16.6 78 7 5 4 7 5 2 1  CA 501 B ATP 602 B
16 1.55 1.54 127.8 -2.23 -0.53 30.4 80 17 12 4 7 1 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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