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PDBsum entry 2oz2

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Hydrolase PDB id
2oz2
Contents
Protein chains
215 a.a.
Ligands
SO4 ×8
D1R ×2
Waters ×261

References listed in PDB file
Key reference
Title Vinyl sulfones as antiparasitic agents and a structural basis for drug design.
Authors I.D.Kerr, J.H.Lee, C.J.Farady, R.Marion, M.Rickert, M.Sajid, K.C.Pandey, C.R.Caffrey, J.Legac, E.Hansell, J.H.Mckerrow, C.S.Craik, P.J.Rosenthal, L.S.Brinen.
Ref. J Biol Chem, 2009, 284, 25697-25703. [DOI no: 10.1074/jbc.M109.014340]
PubMed id 19620707
Abstract
Cysteine proteases of the papain superfamily are implicated in a number of cellular processes and are important virulence factors in the pathogenesis of parasitic disease. These enzymes have therefore emerged as promising targets for antiparasitic drugs. We report the crystal structures of three major parasite cysteine proteases, cruzain, falcipain-3, and the first reported structure of rhodesain, in complex with a class of potent, small molecule, cysteine protease inhibitors, the vinyl sulfones. These data, in conjunction with comparative inhibition kinetics, provide insight into the molecular mechanisms that drive cysteine protease inhibition by vinyl sulfones, the binding specificity of these important proteases and the potential of vinyl sulfones as antiparasitic drugs.
Figure 1.
The structures of cruzain, rhodesain, and falcipain-3. Ribbon representation and superimposition of cruzain (pink), rhodesain (aquamarine), and falcipain-3 (yellow) are shown. Insertions in falcipain-3 are colored purple. All structure figures were prepared in PyMOL (DeLano, 2002).
Figure 3.
The active sites of cruzain (A), rhodesain (B), and falcipain-3 (C).Ball and stick representation shows the conserved catalytic triad and other important residues. The figure is colored as in Fig. 1 with each inhibitor in gray.
The above figures are reprinted by permission from the ASBMB: J Biol Chem (2009, 284, 25697-25703) copyright 2009.
PROCHECK
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