 |
PDBsum entry 2otg
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 2otg calculated with  MOLE 2.0
|
PDB id
|
|
|
|
2otg
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
6 tunnels,
coloured by tunnel radius |
|
6 tunnels,
coloured by
tunnel radius
|
6 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.28 |
1.59 |
20.2 |
-0.32 |
0.16 |
13.1 |
90 |
|
3 |
0 |
1 |
4 |
1 |
0 |
0 |
|
|
 |
|
2 |
 |
1.26 |
2.18 |
25.0 |
0.29 |
0.40 |
15.5 |
76 |
3 |
0 |
1 |
7 |
3 |
0 |
0 |
|
|
3 |
 |
1.27 |
1.59 |
27.5 |
0.26 |
0.44 |
10.3 |
77 |
1 |
0 |
3 |
6 |
3 |
1 |
0 |
|
|
4 |
 |
1.27 |
1.59 |
28.0 |
-0.40 |
0.28 |
14.6 |
73 |
3 |
0 |
2 |
6 |
3 |
0 |
0 |
|
|
5 |
 |
1.11 |
1.74 |
27.7 |
1.20 |
0.26 |
7.0 |
81 |
3 |
2 |
1 |
7 |
0 |
1 |
1 |
|
 |
6 |
 |
1.25 |
1.25 |
34.4 |
0.26 |
0.02 |
8.8 |
77 |
3 |
2 |
1 |
5 |
2 |
1 |
1 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program