PDBsum entry 2ot8 Go to PDB code:  Tunnel analysis for: 2ot8 calculated with MOLE 2.0 PDB id 2ot8 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.55 1.60 19.2 0.58 0.29 5.2 77 1 0 3 2 2 0 1   2 1.32 1.33 29.6 0.95 0.30 4.2 77 1 1 1 7 1 0 1   3 1.26 1.34 32.5 1.35 0.45 2.1 82 1 0 4 9 3 0 1   4 1.31 1.45 36.1 1.37 0.44 3.0 72 1 0 0 12 1 1 1   5 1.41 2.82 17.3 -1.43 -0.07 26.0 74 4 2 0 2 2 1 0   6 1.33 2.70 24.0 -0.26 0.45 16.0 83 3 0 2 5 2 1 0   7 1.41 1.41 15.2 -1.90 -0.88 21.9 92 1 4 3 0 0 0 0   8 1.42 1.42 21.7 -1.78 -0.89 20.4 93 0 4 3 0 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.