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PDBsum entry 2osy

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2osy calculated with MOLE 2.0 PDB id
2osy
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.29 1.29 23.2 -0.97 -0.15 9.8 83 3 1 3 2 2 3 0  
2 1.22 1.48 23.8 -1.37 0.00 18.2 72 2 2 1 3 4 0 0  GLC 1 D GAL 2 D
3 1.22 1.46 26.2 -0.83 -0.14 16.5 79 2 4 2 6 2 0 0  GLC 1 D
4 1.23 1.41 33.2 -1.48 -0.21 17.8 76 3 4 2 4 3 0 0  GLC 1 D
5 1.17 1.17 31.3 -1.70 -0.26 20.3 78 3 4 2 3 3 0 0  GLC 1 C
6 1.49 1.72 19.9 -1.35 -0.01 17.4 71 3 1 1 1 3 0 0  
7 1.57 1.66 18.5 -1.31 0.00 17.6 71 3 1 1 1 3 0 0  
8 1.26 1.44 19.4 1.06 0.07 5.1 90 1 0 1 8 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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