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PDBsum entry 2os5

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Top Page protein ligands Protein-protein interface(s) links
Cytokine PDB id
2os5
Contents
Protein chains
118 a.a.
Ligands
SO4 ×4
Waters ×278

References listed in PDB file
Key reference
Title Structural and functional characterization of a secreted hookworm macrophage migration inhibitory factor (mif) that interacts with the human mif receptor cd74.
Authors Y.Cho, B.F.Jones, J.J.Vermeire, L.Leng, L.Difedele, L.M.Harrison, H.Xiong, Y.K.Kwong, Y.Chen, R.Bucala, E.Lolis, M.Cappello.
Ref. J Biol Chem, 2007, 282, 23447-23456. [DOI no: 10.1074/jbc.M702950200]
PubMed id 17567581
Abstract
Hookworms, parasitic nematodes that infect nearly one billion people worldwide, are a major cause of anemia and malnutrition. We hypothesize that hookworms actively manipulate the host immune response through the production of specific molecules designed to facilitate infection by larval stages and adult worm survival within the intestine. A full-length cDNA encoding a secreted orthologue of the human cytokine, Macrophage Migration Inhibitory Factor (MIF) has been cloned from the hookworm Ancylostoma ceylanicum. Elucidation of the three-dimensional crystal structure of recombinant AceMIF (rAceMIF) revealed an overall structural homology with significant differences in the tautomerase sites of the human and hookworm proteins. The relative bioactivities of human and hookworm MIF proteins were compared using in vitro assays of tautomerase activity, macrophage migration, and binding to MIF receptor CD74. The activity of rAceMIF was not inhibited by the ligand ISO-1, which was previously determined to be an inhibitor of the catalytic site of human MIF. These data define unique immunological, structural, and functional characteristics of AceMIF, thereby establishing the potential for selectively inhibiting the hookworm cytokine as a means of reducing parasite survival and disease pathogenesis.
Figure 3.
FIGURE 3. Topological comparison of AceMIF and hMIF. A, backbone ribbon diagrams of AceMIF and hMIF. Secondary structural elements are represented in red ( -helix), yellow ( -strand), and green (random coil). B, trimers of the two MIFs are superimposed. Human MIF is represented in yellow and AceMIF in red. The approximate location of the active site is between two subunits and indicated by the designation Pro1.
Figure 5.
FIGURE 5. Comparative views of the active sites of hMIF and AceMIF. A, view into the cavity of the active sites of AceMIF and hMIF. The figure shows the substrate HPP bound in the active site of hMIF (50), which is displayed in stick representation. B, superposition of the active sites of AceMIF and hMIF, with HPP bound to hMIF. Residues within hydrogen-bonding distance to HPP are colored in red (AceMIF) or yellow (hMIF). Residue codes correspond to AceMIF. Residues in parentheses correspond to hMIF. Two adjacent protomers (colored in cyan and green) in the trimer form the active site, and there are three active sites in each trimer. C, hydrogen bonds and hydrophobic interactions between HPP and interacting residues in a model of AceMIF:HPP and the crystal structure of hMIF:HPP (50), respectively, are shown. The residues involved in hydrophobic interactions with HPP are drawn as a spiked hemisphere. Distances for hydrogen bonds are in green dashed lines with their distance in Angstrom units.
The above figures are reprinted by permission from the ASBMB: J Biol Chem (2007, 282, 23447-23456) copyright 2007.
PROCHECK
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