spacer
spacer

PDBsum entry 2opo

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) links
Allergen PDB id
2opo
Contents
Protein chains
81 a.a.
85 a.a.
Ligands
SO4 ×4
Metals
_CA ×8
Waters ×292

References listed in PDB file
Key reference
Title Three-Dimensional structure of the cross-Reactive pollen allergen che a 3: visualizing cross-Reactivity on the molecular surfaces of weed, Grass, And tree pollen allergens.
Authors P.Verdino, R.Barderas, M.Villalba, K.Westritschnig, R.Valenta, R.Rodriguez, W.Keller.
Ref. J Immunol, 2008, 180, 2313-2321.
PubMed id 18250440
Abstract
Two EF-hand calcium-binding allergens (polcalcins) occur in the pollen of a wide variety of unrelated plants as highly cross-reactive allergenic molecules. We report the expression, purification, immunological characterization, and the 1.75-A crystal structure of recombinant Che a 3 (rChe a 3), the polcalcin from the weed Chenopodium album. The three-dimensional structure of rChe a 3 resembles an alpha-helical fold that is essentially identical with that of the two EF-hand allergens from birch pollen, Bet v 4, and timothy grass pollen, Phl p 7. The extensive cross-reactivity between Che a 3 and Phl p 7 is demonstrated by competition experiments with IgE Abs from allergic patients as well as specific Ab probes. Amino acid residues that are conserved for the two EF-hand allergen family were identified in multiple sequence alignments of polcalcins from 15 different plants. Next, the three-dimensional structures of rChe a 3, rPhl p 7, and rBet v 4 were used to identify conserved amino acids with high surface exposition to visualize surface patches as potential targets for the polyclonal IgE Ab response of allergic patients. The essentially identical three-dimensional structures of rChe a 3, rPhl p 7, and rBet v 4 explain the extensive cross-reactivity of allergic patients IgE Abs with two EF-hand allergens from unrelated plants. In addition, analyzing the three-dimensional structures of cross-reactive Ags for conserved and surface exposed amino acids may be a first approach to mapping the conformational epitopes on disease-related Ags that are recognized by polyclonal patient Abs.
Secondary reference #1
Title Profilin (che a 2) and polcalcin (che a 3) are relevant allergens of chenopodium album pollen: isolation, Amino acid sequences, And immunologic properties.
Authors R.Barderas, M.Villalba, C.Y.Pascual, E.Batanero, R.Rodríguez.
Ref. J Allergy Clin Immunol, 2004, 113, 1192-1198.
PubMed id 15208604
Abstract
PROCHECK
Go to PROCHECK summary
 Headers

 

spacer

spacer