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PDBsum entry 2oo8

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protein ligands links
Transferase PDB id
2oo8

 

 

 

 

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JSmol PyMol  
Contents
Protein chain
259 a.a. *
Ligands
RAJ
Waters ×121
* Residue conservation analysis
PDB id:
2oo8
Name: Transferase
Title: Synthesis, structural analysis, and sar studies of triazine derivatives as potent, selective tie-2 inhibitors
Structure: Angiopoietin-1 receptor. Chain: x. Fragment: kinase domain. Synonym: tyrosine-protein kinase receptor tie-2, htie2, tyrosine- protein kinase receptor tek, p140 tek, tunica interna endothelial cell kinase, cd202b antigen. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: tek, tie2. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
2.20Å     R-factor:   0.235     R-free:   0.279
Authors: S.F.Bellon,J.Kim
Key ref: B.L.Hodous et al. (2007). Synthesis, structural analysis, and SAR studies of triazine derivatives as potent, selective Tie-2 inhibitors. Bioorg Med Chem Lett, 17, 2886-2889. PubMed id: 17350837 DOI: 10.1016/j.bmcl.2007.02.067
Date:
25-Jan-07     Release date:   20-Mar-07    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q02763  (TIE2_HUMAN) -  Angiopoietin-1 receptor from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1124 a.a.
259 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.7.10.1  - receptor protein-tyrosine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H+
L-tyrosyl-[protein]
+ ATP
= O-phospho-L-tyrosyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
DOI no: 10.1016/j.bmcl.2007.02.067 Bioorg Med Chem Lett 17:2886-2889 (2007)
PubMed id: 17350837  
 
 
Synthesis, structural analysis, and SAR studies of triazine derivatives as potent, selective Tie-2 inhibitors.
B.L.Hodous, S.D.Geuns-Meyer, P.E.Hughes, B.K.Albrecht, S.Bellon, S.Caenepeel, V.J.Cee, S.C.Chaffee, M.Emery, J.Fretland, P.Gallant, Y.Gu, R.E.Johnson, J.L.Kim, A.M.Long, M.Morrison, P.R.Olivieri, V.F.Patel, A.Polverino, P.Rose, L.Wang, H.Zhao.
 
  ABSTRACT  
 
A novel class of selective Tie-2 inhibitors was derived from a multi-kinase inhibitor 1. By reversing the amide connectivity and incorporating aminotriazine or aminopyridine hinge-binding moieties, excellent Tie-2 potency and KDR selectivity could be achieved with 3-substituted terminal aryl rings. X-ray co-crystal structure analysis aided inhibitor design. This series was evaluated on the basis of potency, selectivity, and rat pharmacokinetic parameters.
 

Literature references that cite this PDB file's key reference

  PubMed id Reference
20445741 F.Nussenbaum, and I.M.Herman (2010).
Tumor angiogenesis: insights and innovations.
  J Oncol, 2010, 132641.  
19053777 I.Kufareva, and R.Abagyan (2008).
Type-II kinase inhibitor docking, screening, and profiling using modified structures of active kinase states.
  J Med Chem, 51, 7921-7932.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time.

 

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