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PDBsum entry 2onj

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Pore analysis for: 2onj calculated with MOLE 2.0 PDB id
2onj
Pores calculated on whole structure Pores calculated excluding ligands

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14 pores, coloured by radius 23 pores, coloured by radius 23 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.93 2.40 48.6 -1.66 -0.45 14.1 86 2 4 10 3 1 1 0  ANP 701 A
2 1.65 1.91 50.7 -0.68 -0.21 7.9 90 2 3 10 7 4 0 0  ANP 701 A
3 1.65 1.92 63.5 -1.81 -0.43 17.5 88 4 3 12 4 3 1 0  ANP 701 A
4 1.65 1.90 68.8 -1.63 -0.37 17.1 87 4 5 12 4 3 1 0  ANP 700 B
5 1.65 1.90 78.4 -1.49 -0.47 17.7 91 6 4 16 8 4 0 0  
6 1.63 1.91 97.9 -1.77 -0.60 16.6 89 6 5 20 6 3 1 0  ANP 700 B
7 1.65 1.89 102.4 -1.65 -0.56 16.6 89 6 7 20 6 3 1 0  ANP 701 A
8 2.07 2.02 121.7 -1.94 -0.67 16.5 87 6 8 24 4 2 2 0  ANP 701 A ANP 700 B
9 1.66 1.90 160.4 -0.90 -0.24 15.1 88 7 8 12 11 5 0 0  ANP 700 B
10 2.03 2.36 158.5 -1.52 -0.37 20.2 85 7 9 12 7 2 1 0  ANP 700 B
11 1.65 2.14 38.3 -0.24 0.09 17.4 77 3 3 0 8 2 3 0  
12 1.64 2.05 41.6 -0.32 0.10 16.9 75 3 3 0 7 3 3 0  
13 1.13 1.30 55.0 -0.85 -0.17 15.1 82 3 2 4 6 4 2 0  
14 1.15 1.29 58.8 -0.93 -0.18 16.8 83 3 2 4 7 4 2 0  
15 1.67 2.26 59.5 -0.03 0.31 18.6 77 6 4 0 13 4 4 0  
16 1.15 1.29 61.2 0.22 0.20 11.1 82 4 2 4 12 5 2 0  
17 1.12 1.28 61.9 0.91 0.13 1.8 87 0 2 8 13 6 0 0  
18 1.14 1.28 63.0 -0.60 -0.06 13.4 82 3 2 4 9 4 2 0  
19 1.49 2.57 64.3 1.03 0.34 7.5 82 0 3 1 12 2 2 0  
20 1.19 1.29 64.6 0.24 0.16 10.2 83 4 2 4 13 5 2 0  
21 1.16 1.78 66.1 1.86 0.52 3.4 88 0 4 0 12 1 1 0  
22 1.13 1.28 66.5 -0.67 -0.10 13.8 83 3 2 4 10 4 2 0  
23 1.18 1.31 68.7 0.36 0.24 10.2 82 4 2 4 14 5 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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