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PDBsum entry 2onc

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 2onc calculated with MOLE 2.0 PDB id
2onc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.28 1.36 22.6 -0.97 -0.15 7.1 72 1 1 3 2 2 1 0  
2 1.30 1.42 21.7 -0.74 -0.04 5.3 72 1 1 3 2 2 1 0  
3 1.43 1.43 26.4 -0.38 -0.27 3.1 79 1 0 3 3 3 0 0  
4 1.21 1.33 17.4 -0.92 -0.09 22.3 81 2 2 1 2 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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