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PDBsum entry 2okj

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Top Page protein ligands Protein-protein interface(s) clefts links
Cleft analysis for: 2okj PDB id
2okj
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 5047.73 0.97 68.99 5 11.29 2 12.73 2 17 16 22 21 11 12 2  
2 5202.98 0.00 68.66 6 11.11 3 13.24 1 17 18 24 21 13 12 2  
3 1610.30 0.00 69.27 4 12.52 1 11.96 3 8 4 5 11 2 6 0  
4 1726.73 0.00 69.33 3 9.85 5 9.32 4 7 5 6 12 3 5 0  
5 1676.11 0.00 60.79 10 7.60 8 8.86 5 11 6 5 6 2 3 0  
6 1002.38 0.00 70.19 2 10.48 4 7.27 8 5 4 3 6 3 1 0  
7 1437.75 0.00 63.92 9 7.21 9 6.80 9 7 6 5 6 2 3 0  
8 1132.31 0.00 65.72 8 7.67 7 7.90 7 8 5 3 7 2 3 0  
9 1034.02 0.00 66.76 7 6.78 10 6.78 10 7 5 3 5 2 3 0  
10 773.72 0.00 70.87 1 9.38 6 8.19 6 5 4 3 5 1 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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