PDBsum entry 2oay Go to PDB code:  Tunnel analysis for: 2oay calculated with MOLE 2.0 PDB id 2oay Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.35 1.37 23.3 2.35 0.52 1.9 73 0 1 1 8 0 0 0   2 1.24 3.22 26.5 2.25 0.68 7.2 76 0 2 1 9 1 0 0   3 1.27 1.32 46.2 0.71 -0.03 6.3 80 2 2 4 11 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.