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PDBsum entry 2oap
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Pore analysis for: 2oap calculated with MOLE 2.0
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PDB id
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2oap
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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1 pore,
coloured by radius |
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9 pores,
coloured by radius
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9 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.73 |
1.73 |
26.3 |
-0.08 |
0.26 |
13.0 |
72 |
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2 |
1 |
2 |
5 |
4 |
0 |
0 |
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MSE 121 1
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2 |
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1.41 |
1.54 |
38.5 |
-0.07 |
0.15 |
15.2 |
66 |
3 |
4 |
1 |
3 |
4 |
0 |
0 |
MSE 453 2 MSE 468 2
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3 |
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1.41 |
1.55 |
40.6 |
0.21 |
0.32 |
10.1 |
71 |
5 |
2 |
1 |
4 |
5 |
0 |
0 |
MSE 453 2 MSE 468 2
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4 |
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2.27 |
2.58 |
42.0 |
-2.27 |
-0.41 |
26.6 |
82 |
8 |
5 |
3 |
2 |
3 |
0 |
0 |
ANP 512 1
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5 |
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1.28 |
1.88 |
44.4 |
0.35 |
0.43 |
8.8 |
66 |
2 |
2 |
1 |
4 |
4 |
1 |
0 |
MSE 446 2 MSE 453 2 MSE 468 2
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6 |
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2.26 |
2.58 |
46.2 |
-2.51 |
-0.49 |
28.6 |
82 |
9 |
5 |
3 |
3 |
2 |
0 |
0 |
ANP 512 1
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7 |
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1.21 |
3.00 |
71.4 |
1.23 |
0.33 |
6.2 |
76 |
3 |
2 |
3 |
15 |
5 |
0 |
0 |
MSE 354 2 MSE 372 2 MSE 453 2 MSE 468 2
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8 |
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1.46 |
1.74 |
182.9 |
-1.85 |
-0.51 |
20.1 |
79 |
18 |
8 |
8 |
9 |
4 |
2 |
0 |
ANP 512 1
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9 |
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2.13 |
3.72 |
31.2 |
-2.33 |
-0.62 |
28.1 |
85 |
7 |
4 |
0 |
1 |
0 |
0 |
0 |
MG 512 2 ANP 513 2
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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