PDBsum entry 2o9k Go to PDB code:  Tunnel analysis for: 2o9k calculated with MOLE 2.0 PDB id 2o9k Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.26 1.27 42.0 -1.31 -0.16 21.9 78 6 3 1 2 2 2 0   2 1.26 1.26 46.8 -1.61 -0.14 21.4 77 6 4 4 1 3 2 0   3 1.68 1.84 25.8 -1.15 0.06 16.8 74 5 1 1 1 2 3 0   4 2.06 2.31 18.7 -1.92 -0.45 31.1 85 3 3 2 2 0 0 0   5 1.87 1.88 20.5 -1.51 -0.31 29.1 82 3 3 2 3 0 0 0   6 1.11 2.60 15.4 0.88 0.17 5.3 76 0 1 1 6 1 0 1   7 1.35 2.02 15.7 0.28 0.26 2.1 50 0 0 0 0 4 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.