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PDBsum entry 2o8c
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Pore analysis for: 2o8c calculated with  MOLE 2.0
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PDB id
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2o8c
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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12 pores,
coloured by radius |
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15 pores,
coloured by radius
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15 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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3.94 |
3.92 |
76.1 |
-0.97 |
-0.68 |
10.5 |
95 |
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6 |
4 |
5 |
3 |
0 |
2 |
1 |
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ADP 202 B
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2 |
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2.17 |
2.40 |
77.6 |
-1.89 |
-0.43 |
27.2 |
85 |
6 |
6 |
1 |
5 |
1 |
1 |
0 |
DC 7 E 6OG 8 E DC 9 E DT 18 F DA 19 F
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3 |
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1.37 |
1.41 |
96.4 |
-1.24 |
-0.53 |
18.0 |
77 |
6 |
8 |
2 |
4 |
2 |
1 |
2 |
DC 5 E DG 6 E DC 7 E 6OG 8 E DC 9 E DT 18 F DA 19
F DG 26 F DT 28 F DT 29 F DC 30 F
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4 |
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1.43 |
1.47 |
115.2 |
-1.02 |
-0.39 |
17.0 |
83 |
9 |
7 |
3 |
7 |
1 |
0 |
2 |
DC 5 E DG 6 E DG 26 F DG 27 F DT 28 F DT 29 F DC
30 F
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5 |
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2.29 |
2.40 |
114.9 |
-1.71 |
-0.54 |
19.2 |
79 |
7 |
11 |
5 |
2 |
2 |
4 |
1 |
DC 7 E 6OG 8 E DC 9 E DT 18 F DA 19 F DG 26 F DG
27 F
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6 |
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1.78 |
2.18 |
137.0 |
-1.58 |
-0.41 |
19.5 |
84 |
11 |
9 |
6 |
6 |
3 |
5 |
1 |
DG 26 F DG 27 F
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7 |
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1.45 |
1.44 |
150.9 |
-1.25 |
-0.48 |
16.2 |
81 |
8 |
13 |
7 |
6 |
2 |
3 |
3 |
DC 5 E DG 6 E DG 26 F DG 27 F DT 28 F DT 29 F DC
30 F
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8 |
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1.95 |
2.42 |
160.8 |
-1.56 |
-0.52 |
14.9 |
86 |
9 |
9 |
13 |
6 |
3 |
4 |
0 |
DG 1 E DG 26 F DG 27 F
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9 |
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1.88 |
3.22 |
157.4 |
-1.46 |
-0.60 |
14.6 |
90 |
8 |
5 |
6 |
5 |
1 |
3 |
0 |
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10 |
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1.92 |
2.38 |
161.6 |
-1.37 |
-0.44 |
16.3 |
81 |
7 |
9 |
9 |
8 |
3 |
3 |
0 |
DG 1 E DG 26 F DG 27 F
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11 |
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1.97 |
2.83 |
181.4 |
-1.06 |
-0.42 |
15.4 |
85 |
11 |
6 |
11 |
12 |
4 |
2 |
3 |
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12 |
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1.23 |
1.24 |
185.5 |
-1.79 |
-0.40 |
21.2 |
78 |
14 |
12 |
10 |
8 |
6 |
5 |
0 |
DC 7 E 6OG 8 E DC 9 E DT 18 F DA 19 F DG 26 F DG
27 F
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13 |
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2.44 |
3.92 |
186.9 |
-1.58 |
-0.48 |
16.2 |
88 |
13 |
8 |
12 |
8 |
2 |
4 |
0 |
DG 26 F DG 27 F
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14 |
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1.84 |
3.62 |
187.7 |
-1.45 |
-0.38 |
18.2 |
84 |
11 |
8 |
8 |
10 |
2 |
3 |
0 |
DG 26 F DG 27 F
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15 |
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1.89 |
3.07 |
277.2 |
-1.47 |
-0.36 |
16.9 |
84 |
17 |
10 |
14 |
16 |
6 |
4 |
3 |
DG 26 F DG 27 F
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program