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PDBsum entry 2o6v

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 2o6v calculated with MOLE 2.0 PDB id
2o6v
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.28 1.28 37.9 0.11 -0.05 11.8 79 4 4 1 8 1 1 0  SLZ 548 F
2 1.30 1.30 38.7 0.28 0.05 12.4 80 4 4 1 9 1 1 0  SLZ 548 F
3 1.31 1.37 41.5 -0.18 -0.08 14.6 83 5 4 2 7 0 1 0  
4 1.30 1.44 42.0 0.27 0.07 13.4 84 5 4 2 8 0 1 0  
5 1.29 1.29 22.1 -1.89 -0.67 20.9 73 4 2 1 2 0 0 0  
6 1.22 1.30 24.1 -2.16 -0.67 22.1 77 4 2 1 0 1 0 0  
7 1.67 3.18 16.3 -2.01 -0.70 27.0 83 2 2 0 1 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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