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PDBsum entry 2o4n

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 2o4n calculated with MOLE 2.0 PDB id
2o4n
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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0 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.39 1.39 15.6 -1.09 -0.29 21.1 69 2 1 0 2 0 1 0  TPV 300 A GOL 301 B
2 2.16 2.33 18.1 0.14 -0.10 16.6 94 0 4 0 4 0 0 0  TPV 300 A GOL 301 B
3 1.18 3.39 27.4 0.86 0.13 11.3 97 0 4 0 9 0 0 0  TPV 300 A
4 1.39 1.39 28.2 0.25 -0.03 13.7 84 2 4 0 7 0 1 0  TPV 300 A GOL 301 B
5 1.39 1.39 28.2 0.09 0.03 14.6 74 3 3 0 5 1 2 0  TPV 300 A GOL 301 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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