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PDBsum entry 2o25
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Tunnel analysis for: 2o25 calculated with  MOLE 2.0
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PDB id
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2o25
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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9 tunnels,
coloured by tunnel radius |
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9 tunnels,
coloured by
tunnel radius
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9 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.13 |
2.60 |
23.0 |
-1.22 |
-0.20 |
18.7 |
77 |
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3 |
4 |
1 |
3 |
1 |
1 |
0 |
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2 |
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1.27 |
2.26 |
25.5 |
-0.16 |
0.03 |
9.0 |
88 |
1 |
2 |
3 |
7 |
1 |
1 |
0 |
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3 |
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1.27 |
2.32 |
35.4 |
-0.64 |
-0.07 |
16.0 |
84 |
3 |
3 |
4 |
8 |
1 |
2 |
0 |
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4 |
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1.27 |
2.38 |
46.4 |
-0.77 |
-0.16 |
16.4 |
81 |
5 |
3 |
2 |
8 |
1 |
1 |
0 |
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5 |
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1.26 |
2.37 |
47.5 |
-1.35 |
-0.26 |
20.1 |
80 |
4 |
8 |
6 |
6 |
3 |
1 |
0 |
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6 |
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1.18 |
1.18 |
26.0 |
2.65 |
0.90 |
4.8 |
71 |
2 |
1 |
0 |
9 |
2 |
0 |
0 |
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7 |
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1.12 |
2.39 |
38.0 |
2.50 |
0.87 |
3.2 |
82 |
1 |
1 |
1 |
12 |
1 |
1 |
0 |
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8 |
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1.50 |
2.79 |
17.8 |
-0.60 |
-0.09 |
15.7 |
76 |
1 |
3 |
1 |
4 |
2 |
0 |
0 |
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9 |
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1.49 |
1.56 |
19.9 |
-1.14 |
-0.65 |
14.3 |
89 |
2 |
0 |
0 |
2 |
0 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program