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PDBsum entry 2nzj

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Top Page protein ligands metals Protein-protein interface(s) clefts links
Cleft analysis for: 2nzj PDB id
2nzj
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 5757.33 1.27 69.66 1 11.11 1 16.23 1 18 17 19 28 7 9 4 GDP 1003[C](1 atom)
2 4531.36 0.00 62.29 6 11.01 2 12.42 3 12 10 20 16 4 6 2  
3 2257.45 0.00 67.36 2 10.14 3 14.38 2 7 9 8 11 3 2 0  
4 2497.92 0.00 53.31 10 9.67 4 11.76 5 3 4 8 6 3 3 1  
5 1884.94 0.00 64.58 4 7.03 6 9.75 6 8 3 9 11 2 3 1  
6 1639.83 0.00 61.95 8 6.28 9 7.92 7 7 3 6 10 3 2 1  
7 990.14 0.00 64.87 3 8.76 5 12.20 4 2 6 6 4 1 3 0  
8 820.97 0.00 54.91 9 5.85 10 7.55 9 2 3 7 1 2 3 1  
9 559.41 0.00 62.06 7 6.28 8 7.84 8 4 2 1 3 1 0 0  
10 634.92 0.00 62.95 5 6.37 7 6.65 10 3 2 5 4 2 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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