PDBsum entry 2nz9 Go to PDB code:  Tunnel analysis for: 2nz9 calculated with MOLE 2.0 PDB id 2nz9 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.27 1.63 27.1 -0.55 -0.24 8.9 69 0 2 1 2 5 0 0   2 1.55 2.31 16.4 -1.06 0.20 11.1 69 3 0 0 1 3 0 0   3 1.61 1.76 16.4 -1.98 -0.57 17.5 91 2 2 2 2 0 0 0   4 1.20 1.31 27.5 0.92 0.33 3.3 73 2 0 3 6 2 1 1   5 1.14 1.33 18.0 1.35 0.24 1.7 88 0 0 4 5 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.