PDBsum entry 2ny0 Go to PDB code:  Tunnel analysis for: 2ny0 calculated with MOLE 2.0 PDB id 2ny0 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.34 20.9 0.32 0.30 2.0 67 0 0 2 3 4 2 0   2 1.22 1.42 21.5 -0.50 -0.03 6.1 72 0 1 3 2 3 1 1  NAG 762 A 3 1.28 1.34 21.7 0.16 0.32 2.0 66 0 0 1 4 4 2 0   4 1.20 1.20 32.1 -2.19 -0.67 22.2 92 3 4 6 2 0 0 0  NAG 776 A 5 1.20 1.20 32.9 -0.66 -0.45 10.8 97 5 1 5 3 0 2 0  NAG 963 A 6 1.20 1.20 35.7 -1.91 -0.59 20.6 90 3 6 4 2 0 0 0   7 1.14 1.14 20.8 -0.13 -0.51 6.0 85 1 1 3 4 1 5 0   8 1.46 1.52 21.5 -0.65 -0.65 2.7 100 1 0 10 2 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.