PDBsum entry 2nvz Go to PDB code:  Tunnel analysis for: 2nvz calculated with MOLE 2.0 PDB id 2nvz Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 1.22 58.3 -1.92 -0.58 24.1 82 14 6 3 1 0 5 0  DC 21 T DT 22 T DC 23 T 2 1.14 1.25 66.9 -1.94 -0.55 20.6 84 8 4 7 4 0 5 0  UTP 3000 B G 8 R G 9 R A 10 R DC 21 T DT 22 T 3 1.22 1.25 74.9 -1.81 -0.58 23.0 84 11 7 4 1 1 3 0  A 1 R DC 21 T DT 22 T DC 23 T DG 26 T DA 27 T DT 28 T 4 1.20 1.27 84.8 -1.37 -0.50 19.7 87 14 7 6 4 1 4 0  A 1 R DC 21 T DT 22 T DC 23 T 5 1.20 1.27 85.3 -1.97 -0.64 24.4 86 13 7 4 1 0 3 0  A 1 R G 4 R A 5 R G 6 R DG 17 T DA 18 T DC 21 T DT 22 T DC 23 T DT 24 T DC 25 T 6 1.11 2.60 17.2 1.11 0.41 11.5 69 2 1 0 4 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.