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PDBsum entry 2nt0

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 2nt0 calculated with MOLE 2.0 PDB id
2nt0
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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10 tunnels, coloured by tunnel radius 12 tunnels, coloured by tunnel radius 12 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.53 14.2 -1.69 -0.51 14.3 78 1 1 2 0 1 2 0  
2 1.54 15.1 -2.26 -0.60 19.5 78 1 1 2 0 1 2 0  
3 1.37 15.1 -0.27 -0.34 8.1 89 2 0 2 4 0 0 0  
4 1.38 16.0 -0.71 -0.44 10.9 90 2 0 2 2 0 0 0  
5 1.50 16.0 -0.73 -0.44 11.1 90 2 0 2 2 0 0 0  
6 1.50 18.1 -0.29 -0.31 8.8 89 4 0 2 4 0 0 0  
7 1.28 18.6 1.93 0.48 1.4 70 1 0 0 7 3 0 0  
8 1.27 19.1 1.94 0.47 1.4 67 1 0 0 6 3 0 0  
9 2.39 7.4 0.13 -0.26 3.7 60 1 0 0 2 1 0 0  
10 1.36 12.8 0.71 -0.04 2.9 72 1 0 0 4 1 0 0  
11 1.65 6.1 -1.10 -0.21 13.2 86 1 0 1 2 0 1 0  
12 1.51 13.4 0.24 0.17 9.9 76 1 0 1 2 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
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