spacer
spacer

PDBsum entry 2nmx

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) clefts links
Cleft analysis for: 2nmx PDB id
2nmx
View options
Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 11673.28 4.89 72.62 1 14.88 1 24.38 1 33 23 47 34 23 24 0 M25 311[A], TRS 361[B], M25 312[B]
(39 atoms)
2 2384.86 0.00 66.18 2 9.15 3 10.21 2 7 5 16 6 3 10 0  
3 801.14 0.00 58.37 8 8.67 4 7.99 6 2 2 6 6 0 2 0  
4 600.33 0.00 64.39 3 8.36 5 8.91 3 3 2 4 4 0 2 0  
5 646.31 0.00 58.24 9 6.35 8 6.90 9 1 1 6 6 0 2 0  
6 560.25 0.00 63.72 5 9.77 2 8.89 4 4 2 5 3 0 2 0  
7 572.06 0.00 52.88 10 7.66 7 8.57 5 3 1 4 1 1 4 0  
8 606.66 0.00 63.84 4 5.30 9 6.69 10 3 2 3 4 3 0 0  
9 475.03 0.00 58.95 7 4.91 10 7.10 8 3 1 4 1 1 4 0  
10 353.53 0.00 61.53 6 8.25 6 7.15 7 2 1 2 1 2 1 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
spacer
spacer