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PDBsum entry 2nmv
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Pore analysis for: 2nmv calculated with MOLE 2.0
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PDB id
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2nmv
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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8 pores,
coloured by radius |
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8 pores,
coloured by radius
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8 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.32 |
1.34 |
29.1 |
-0.41 |
-0.10 |
6.5 |
82 |
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1 |
2 |
4 |
2 |
4 |
0 |
0 |
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DT 1 D DT 2 D DT 3 D DT 4 D DT 5 D
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2 |
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1.32 |
1.33 |
29.6 |
-0.85 |
-0.52 |
6.7 |
87 |
3 |
1 |
3 |
0 |
2 |
0 |
0 |
DT 1 D DT 2 D DT 3 D DT 4 D DT 5 D
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3 |
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2.36 |
6.07 |
30.1 |
-2.98 |
-0.51 |
40.1 |
74 |
8 |
4 |
1 |
2 |
2 |
0 |
0 |
DT 1 D DT 2 D FLU 600 D
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4 |
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1.16 |
1.31 |
35.2 |
-1.01 |
-0.04 |
18.5 |
79 |
4 |
2 |
4 |
6 |
4 |
0 |
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DT 5 D
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5 |
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1.34 |
1.33 |
35.5 |
-0.43 |
-0.33 |
5.5 |
83 |
1 |
2 |
3 |
5 |
3 |
0 |
0 |
DT 1 D DT 2 D DT 3 D DT 4 D DT 5 D
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6 |
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1.29 |
1.65 |
39.4 |
-2.39 |
-0.38 |
33.5 |
72 |
7 |
2 |
1 |
1 |
2 |
0 |
0 |
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7 |
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1.16 |
1.31 |
44.3 |
-1.02 |
-0.43 |
12.5 |
84 |
5 |
2 |
4 |
4 |
2 |
0 |
0 |
DT 4 D DT 5 D
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8 |
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3.51 |
3.51 |
53.4 |
-1.08 |
-0.17 |
17.7 |
79 |
3 |
4 |
4 |
1 |
2 |
0 |
0 |
DT 1 D DT 2 D NML 103 D FLU 600 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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