 |
PDBsum entry 2n1f
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 2n1f calculated with MOLE 2.0
|
PDB id
|
|
|
|
2n1f
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
13 pores,
coloured by radius |
 |
13 pores,
coloured by radius
|
13 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.23 |
1.25 |
90.2 |
-0.21 |
-0.25 |
12.5 |
77 |
 |
4 |
7 |
5 |
13 |
2 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.21 |
1.22 |
91.9 |
-0.34 |
-0.25 |
14.2 |
76 |
4 |
7 |
5 |
13 |
2 |
1 |
0 |
|
 |
3 |
 |
1.21 |
1.22 |
92.1 |
-0.39 |
-0.26 |
14.7 |
76 |
4 |
7 |
6 |
13 |
2 |
1 |
0 |
|
 |
4 |
 |
1.30 |
1.24 |
133.9 |
-0.37 |
-0.22 |
15.4 |
79 |
4 |
15 |
7 |
25 |
3 |
2 |
0 |
|
 |
5 |
 |
1.23 |
1.26 |
134.8 |
-0.84 |
-0.45 |
16.3 |
80 |
3 |
16 |
8 |
21 |
1 |
2 |
0 |
|
 |
6 |
 |
1.78 |
1.86 |
171.9 |
-2.33 |
-0.62 |
26.8 |
80 |
11 |
16 |
9 |
5 |
2 |
1 |
0 |
|
 |
7 |
 |
1.29 |
1.87 |
178.5 |
-0.86 |
-0.19 |
20.7 |
80 |
11 |
10 |
5 |
17 |
3 |
0 |
0 |
|
 |
8 |
 |
1.33 |
2.29 |
190.3 |
-1.60 |
-0.45 |
23.8 |
82 |
12 |
15 |
8 |
11 |
2 |
0 |
0 |
|
 |
9 |
 |
1.17 |
1.27 |
202.6 |
-1.46 |
-0.35 |
22.4 |
80 |
14 |
12 |
9 |
11 |
3 |
0 |
0 |
|
 |
10 |
 |
1.69 |
1.76 |
206.7 |
-1.80 |
-0.53 |
22.4 |
79 |
12 |
16 |
8 |
8 |
3 |
1 |
0 |
|
 |
11 |
 |
1.25 |
1.76 |
224.7 |
-1.42 |
-0.38 |
21.5 |
80 |
15 |
15 |
9 |
13 |
4 |
1 |
0 |
|
 |
12 |
 |
1.22 |
1.24 |
232.2 |
-0.92 |
-0.35 |
18.3 |
79 |
13 |
17 |
7 |
20 |
5 |
1 |
0 |
|
 |
13 |
 |
1.22 |
1.23 |
234.0 |
-1.03 |
-0.26 |
20.4 |
78 |
15 |
16 |
7 |
23 |
5 |
2 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |