PDBsum entry 2miz Go to PDB code:  Tunnel analysis for: 2miz calculated with MOLE 2.0 PDB id 2miz Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 2.07 16.9 -0.84 -0.34 5.8 91 0 1 1 2 1 0 0   2 1.89 2.03 17.1 -1.37 -0.24 18.3 91 3 1 1 2 1 0 0   3 1.47 1.69 17.5 -1.36 -0.13 19.3 88 3 1 1 2 2 0 0   4 1.77 3.61 20.6 -2.26 -0.16 28.9 79 4 1 0 1 2 0 0   5 1.47 1.68 21.0 -2.21 -0.07 29.2 77 4 1 0 1 3 0 0   6 1.28 1.42 16.1 -0.33 0.40 12.4 56 2 0 0 2 2 0 0   7 1.28 1.42 16.5 0.08 0.39 10.4 60 1 0 0 2 2 0 0   8 1.16 1.41 17.2 1.06 0.29 1.6 77 0 0 2 5 1 0 1   9 1.17 1.43 20.1 0.85 0.21 1.7 79 0 0 3 6 1 0 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.