PDBsum entry 2mcp Go to PDB code:  Tunnel analysis for: 2mcp calculated with MOLE 2.0 PDB id 2mcp Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.30 1.35 16.9 0.38 -0.36 2.2 89 0 0 4 3 0 1 0   2 1.61 2.78 21.9 0.09 -0.41 4.1 102 1 0 3 3 0 0 0   3 1.61 2.86 22.7 -0.04 -0.46 4.5 99 1 0 4 3 1 0 0   4 1.29 1.34 26.5 0.30 -0.40 2.0 94 0 0 7 3 1 1 0   5 1.31 2.63 26.9 0.21 -0.31 4.7 92 1 0 2 5 0 0 0   6 1.29 1.35 27.3 0.23 -0.45 2.0 98 0 0 7 4 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.