PDBsum entry 2ma9 Go to PDB code:  Tunnel analysis for: 2ma9 calculated with MOLE 2.0 PDB id 2ma9 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.30 1.43 19.0 -0.72 -0.13 12.8 81 2 1 3 4 2 1 0   2 1.09 1.52 34.7 1.74 0.55 3.1 77 2 0 2 12 4 0 0   3 1.10 1.37 36.1 1.22 0.54 5.4 73 2 1 1 10 5 1 0   4 1.13 1.51 70.6 0.63 0.23 10.0 79 4 3 3 15 4 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.