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PDBsum entry 2m55

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Top Page protein metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2m55 calculated with MOLE 2.0 PDB id
2m55
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.21 1.41 19.0 2.33 0.63 1.3 81 0 0 0 6 2 0 0  
2 1.41 2.31 19.2 2.35 0.94 5.7 74 0 1 0 6 2 0 0  
3 1.40 2.16 23.4 1.57 0.66 7.3 80 0 3 0 7 2 0 0  
4 1.40 2.09 24.7 1.72 0.56 4.2 82 1 1 0 8 2 0 0  
5 1.40 2.19 27.9 2.24 0.83 6.3 73 0 1 0 9 2 0 0  
6 1.41 2.23 31.3 1.11 0.32 6.5 82 1 2 0 8 2 0 0  
7 1.41 2.25 39.6 1.90 0.68 3.0 77 2 0 1 11 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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