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PDBsum entry 2lz6

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Signaling protein PDB id
2lz6
Contents
Protein chains
76 a.a.
60 a.a.

References listed in PDB file
Key reference
Title Distinct ubiquitin binding modes exhibited by sh3 domains: molecular determinants and functional implications.
Authors J.L.Ortega roldan, S.Casares, M.Ringkjøbing jensen, N.Cárdenes, J.Bravo, M.Blackledge, A.I.Azuaga, N.A.Van nuland.
Ref. Plos One, 2013, 8, e73018. [DOI no: 10.1371/journal.pone.0073018]
PubMed id 24039852
Abstract
SH3 domains constitute a new type of ubiquitin-binding domains. We previously showed that the third SH3 domain (SH3-C) of CD2AP binds ubiquitin in an alternative orientation. We have determined the structure of the complex between first CD2AP SH3 domain and ubiquitin and performed a structural and mutational analysis to decipher the determinants of the SH3-C binding mode to ubiquitin. We found that the Phe-to-Tyr mutation in CD2AP and in the homologous CIN85 SH3-C domain does not abrogate ubiquitin binding, in contrast to previous hypothesis and our findings for the first two CD2AP SH3 domains. The similar alternative binding mode of the SH3-C domains of these related adaptor proteins is characterised by a higher affinity to C-terminal extended ubiquitin molecules. We conclude that CD2AP/CIN85 SH3-C domain interaction with ubiquitin constitutes a new ubiquitin-binding mode involved in a different cellular function and thus changes the previously established mechanism of EGF-dependent CD2AP/CIN85 mono-ubiquitination.
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