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PDBsum entry 2lgk

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protein metals Protein-protein interface(s) links
Ligase/DNA binding protein PDB id
2lgk

 

 

 

 

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Contents
Protein chains
69 a.a.
12 a.a.
Metals
_ZN ×3
PDB id:
2lgk
Name: Ligase/DNA binding protein
Title: Nmr structure of uhrf1 phd domains in a complex with histone h3 peptide
Structure: E3 ubiquitin-protein ligase uhrf1. Chain: a. Fragment: unp residues 298-366. Synonym: inverted ccaat box-binding protein of 90 kda, nuclear protein 95, nuclear zinc finger protein np95, hunp95, ring finger protein 106, transcription factor icbp90, ubiquitin-like phd and ring finger domain-containing protein 1, ubiquitin-like-containing phd and ring finger domains protein 1. Engineered: yes.
Source: Homo sapiens. Organism_taxid: 9606. Expressed in: escherichia coli. Expression_system_taxid: 562. Synthetic: yes. Other_details: the peptide was chemically synthesized.
NMR struc: 20 models
Authors: C.Wang,J.Shen,Z.Yang,P.Chen,B.Zhao,W.Hu,W.Lan,X.Tong,H.Wu,G.Li,C.Cao
Key ref: C.Wang et al. (2011). Structural basis for site-specific reading of unmodified R2 of histone H3 tail by UHRF1 PHD finger. Cell Res, 21, 1379-1382. PubMed id: 21808299
Date:
28-Jul-11     Release date:   28-Sep-11    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q96T88  (UHRF1_HUMAN) -  E3 ubiquitin-protein ligase UHRF1 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
793 a.a.
69 a.a.
Protein chain
No UniProt id for this chain
Struc: 12 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: Chain A: E.C.2.3.2.27  - RING-type E3 ubiquitin transferase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N6- ubiquitinyl-[acceptor protein]-L-lysine

 

 
Cell Res 21:1379-1382 (2011)
PubMed id: 21808299  
 
 
Structural basis for site-specific reading of unmodified R2 of histone H3 tail by UHRF1 PHD finger.
C.Wang, J.Shen, Z.Yang, P.Chen, B.Zhao, W.Hu, W.Lan, X.Tong, H.Wu, G.Li, C.Cao.
 
  ABSTRACT  
 
No abstract given.

 

Literature references that cite this PDB file's key reference

  PubMed id Reference
23211769 C.A.Musselman, M.E.Lalonde, J.Côté, and T.G.Kutateladze (2012).
Perceiving the epigenetic landscape through histone readers.
  Nat Struct Mol Biol, 19, 1218-1227.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time.

 

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