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PDBsum entry 2l84

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protein ligands links
Transferase PDB id
2l84

 

 

 

 

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JSmol PyMol  
Contents
Protein chain
121 a.a. *
Ligands
J28
* Residue conservation analysis
PDB id:
2l84
Name: Transferase
Title: Solution nmr structures of cbp bromodomain with small molecule j28
Structure: Creb-binding protein. Chain: a. Fragment: bromo domain residues 1081-1197. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: crebbp, cbp. Expressed in: escherichia coli. Expression_system_taxid: 526563.
NMR struc: 20 models
Authors: J.C.Borah,S.Mujtaba,I.Karakikes,L.Zeng,M.Muller,J.Patel,N.Moshkina, K.Morohashi,W.Zhang,G.Gerona-Navarro,R.J.Hajjar,M.Zhou
Key ref: J.C.Borah et al. (2011). A small molecule binding to the coactivator CREB-binding protein blocks apoptosis in cardiomyocytes. Chem Biol, 18, 531-541. PubMed id: 21513889
Date:
03-Jan-11     Release date:   19-Jan-11    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q92793  (CBP_HUMAN) -  CREB-binding protein from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
2442 a.a.
121 a.a.*
Key:    PfamA domain  Secondary structure  CATH domain
* PDB and UniProt seqs differ at 3 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class 1: E.C.2.3.1.-  - ?????
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
   Enzyme class 2: E.C.2.3.1.48  - histone acetyltransferase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-lysyl-[protein] + acetyl-CoA = N6-acetyl-L-lysyl-[protein] + CoA + H+
L-lysyl-[protein]
+ acetyl-CoA
= N(6)-acetyl-L-lysyl-[protein]
+ CoA
+ H(+)
Note, where more than one E.C. class is given (as above), each may correspond to a different protein domain or, in the case of polyprotein precursors, to a different mature protein.
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    Added reference    
 
 
Chem Biol 18:531-541 (2011)
PubMed id: 21513889  
 
 
A small molecule binding to the coactivator CREB-binding protein blocks apoptosis in cardiomyocytes.
J.C.Borah, S.Mujtaba, I.Karakikes, L.Zeng, M.Muller, J.Patel, N.Moshkina, K.Morohashi, W.Zhang, G.Gerona-Navarro, R.J.Hajjar, M.M.Zhou.
 
  ABSTRACT  
 
No abstract given.

 

Literature references that cite this PDB file's key reference

  PubMed id Reference
22498752 C.H.Arrowsmith, C.Bountra, P.V.Fish, K.Lee, and M.Schapira (2012).
Epigenetic protein families: a new frontier for drug discovery.
  Nat Rev Drug Discov, 11, 384-400.  
The most recent references are shown first. Citation data come partly from CiteXplore and partly from an automated harvesting procedure. Note that this is likely to be only a partial list as not all journals are covered by either method. However, we are continually building up the citation data so more and more references will be included with time.

 

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