spacer
spacer

PDBsum entry 2k7n

Go to PDB code: 
Top Page protein tunnels links
Tunnel analysis for: 2k7n calculated with MOLE 2.0 PDB id
2k7n
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
10 tunnels, coloured by tunnel radius 10 tunnels, coloured by tunnel radius 10 tunnels, coloured as in
list below
Tunnels
Length
Hydropathy
Hydrophobicity
Polarity
Mutability
Residue..type
Ligands
Radius
1 1.75 13.7 1.90 0.71 6.4 90 1 1 0 6 0 1 0  
2 1.75 14.7 1.30 0.53 9.1 90 1 1 0 7 0 1 0  
3 1.37 19.2 -0.21 0.38 12.3 86 2 1 2 3 2 0 0  
4 1.37 22.6 -0.67 0.18 20.3 87 2 1 2 4 1 1 0  
5 1.37 23.6 -0.17 0.31 17.4 90 2 1 2 4 1 0 0  
6 1.55 8.3 -1.33 -0.01 30.4 87 3 1 0 1 1 0 0  
7 1.70 9.0 -1.87 -0.11 36.0 84 3 1 0 1 1 0 0  
8 1.36 10.5 -0.57 0.16 24.2 78 2 1 0 3 0 0 0  
9 1.28 10.6 1.36 0.81 12.0 79 1 1 0 3 1 1 0  
10 2.23 4.3 -1.79 0.11 36.9 86 2 1 0 1 0 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.
spacer
spacer