 |
PDBsum entry 2k61
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 2k61 calculated with  MOLE 2.0
|
PDB id
|
|
|
|
2k61
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
8 tunnels,
coloured by tunnel radius |
|
9 tunnels,
coloured by
tunnel radius
|
9 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.11 |
1.35 |
18.5 |
0.18 |
0.23 |
18.7 |
79 |
|
1 |
4 |
0 |
6 |
1 |
0 |
0 |
|
|
 |
|
2 |
 |
2.26 |
3.37 |
18.8 |
0.49 |
0.38 |
18.2 |
81 |
1 |
4 |
0 |
9 |
2 |
0 |
0 |
|
|
3 |
 |
1.11 |
1.35 |
20.0 |
0.88 |
0.28 |
13.2 |
77 |
0 |
2 |
0 |
6 |
1 |
0 |
0 |
|
|
4 |
 |
2.26 |
3.37 |
22.5 |
0.80 |
0.45 |
13.7 |
83 |
1 |
3 |
0 |
8 |
2 |
0 |
0 |
|
|
5 |
 |
1.11 |
1.34 |
22.8 |
0.29 |
0.24 |
16.1 |
82 |
1 |
4 |
0 |
6 |
1 |
0 |
0 |
|
|
6 |
 |
1.11 |
1.35 |
27.7 |
0.77 |
0.35 |
11.6 |
78 |
1 |
4 |
1 |
6 |
1 |
0 |
0 |
|
|
7 |
 |
1.11 |
1.35 |
31.8 |
1.47 |
0.49 |
6.5 |
86 |
0 |
2 |
0 |
9 |
1 |
0 |
0 |
|
|
8 |
 |
1.26 |
2.01 |
32.9 |
1.69 |
0.64 |
5.5 |
88 |
0 |
2 |
0 |
11 |
2 |
0 |
0 |
|
 |
9 |
 |
2.26 |
3.37 |
34.9 |
1.10 |
0.51 |
9.6 |
81 |
1 |
4 |
1 |
10 |
2 |
0 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program