PDBsum entry 2jlr Go to PDB code:  Tunnel analysis for: 2jlr calculated with MOLE 2.0 PDB id 2jlr Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.42 1.96 20.6 -0.44 0.04 17.9 81 3 1 1 2 1 0 1   2 1.55 1.73 21.0 -1.73 -0.40 22.3 83 4 2 0 1 1 0 0   3 1.10 2.29 32.8 -0.47 -0.01 15.0 90 3 0 2 5 1 1 0   4 1.54 1.74 34.0 -0.63 0.01 19.9 80 4 2 2 4 2 1 1   5 1.53 1.75 37.0 -1.46 -0.10 25.2 87 5 3 3 5 1 1 1   6 1.55 1.73 39.0 -2.44 -0.35 32.5 80 6 5 1 2 1 2 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.