PDBsum entry 2jkx Go to PDB code:  Tunnel analysis for: 2jkx calculated with MOLE 2.0 PDB id 2jkx Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.38 1.38 18.5 -0.82 -0.46 12.6 82 2 1 3 2 2 0 0   2 1.38 1.38 24.8 -1.23 -0.61 14.0 85 2 1 3 1 2 2 0   3 1.38 1.88 18.7 -1.43 -0.49 17.7 87 1 3 2 2 2 0 0   4 1.40 1.59 19.0 -0.39 -0.17 10.3 73 1 3 0 0 2 0 0   5 1.43 1.61 19.6 -1.22 -0.13 16.5 77 2 3 1 0 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.