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PDBsum entry 2jkb

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Cleft analysis for: 2jkb PDB id
2jkb
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Binding-site(s)
Binding-surface(s)
Coloured by
 cleft (as in table below)
 closest atom type
 residue type
 residue conservation
Clefts
R1
ratio
Accessible
vertices
Buried
vertices
Average
depth
Residue..type
Ligands
Volume
1 5911.73 1.59 64.46 6 10.55 4 19.79 1 17 17 31 20 13 9 0 EDO 1704[A](1 atom)
2 3713.34 0.00 64.59 5 10.87 3 14.77 2 9 7 18 10 13 7 0 EDO 1701[A] (4 atoms)
3 2623.22 0.00 69.01 3 12.45 1 11.52 3 11 4 17 8 7 3 0 SKD 1698[A] (20 atoms)
4 1535.20 0.00 74.90 1 12.41 2 8.90 6 6 5 7 10 2 3 0 EDO 1702[A] (4 atoms)
5 993.94 0.00 63.01 8 10.13 5 10.15 4 2 6 10 4 1 1 0  
6 1353.38 0.00 63.66 7 8.09 6 9.18 5 9 6 9 4 3 5 0  
7 710.86 0.00 64.80 4 6.76 8 7.73 8 4 4 4 4 4 1 0  
8 518.06 0.00 62.06 9 6.81 7 6.60 9 2 2 4 3 2 0 0  
9 575.44 0.00 59.33 10 5.67 10 7.90 7 6 2 1 1 2 1 0  
10 439.59 0.00 69.87 2 5.75 9 6.23 10 1 1 4 4 1 2 0  
 Protein structure

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C
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